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Academician

BERNA SARIYAR AKBULUT

Profesör

Marmara Üniversitesi Mühendislik Fakültesi Biyomühendislik Bölümü

Research topics OpenAlex
  1. Ana Dal Mühendislik Temel Alanı
  2. Yan Dal Biyomühendislik
Keywords YÖKSİS
Articles 57 YÖKSİS 57 · OpenAlex 0 Total citations 1,151 h-index 18 · OpenAlex OpenAlex coverage %95 matched 53 / 56 Q1 articles 21 Scopus · WoS Q1 16 Best field rank #902 / 24,860 Main field · top 3.6% Co-authors 143 24 Turkish institutions

Citation impact

Citation counts of the articles matched in OpenAlex, citing publications from Crossref and the Stanford/Elsevier list. Sources are shown separately and never added up.

OpenAlex YÖKSİS articles matched in OpenAlex: 53 + YÖKSİS · co-author record: 1
h-index 18 Percentile in Türkiye: 96 #77 of 2,222 at their university by h-index
i10-index
28
Total citations
1,151
Top 4.0% in Türkiye
Per article
21.3
FWCI
1.15
1.00 = world average
World top 1%
1
World top 10%
4

Most cited articles

  1. Metabolic Engineering through Cofactor Manipulation and Its Effects on Metabolic Flux Redistribution in Escherichia coli 2002 world top 10% 256 citations
  2. Membrane Active Peptides and Their Biophysical Characterization 2018 world top 1% 200 citations
  3. Assessment of Berberine as a Multi target Antimicrobial A Multi omics Study for Drug Discovery and Repositioning 2014 world top 10% 66 citations
How is this computed?

h-index and citations are computed from the citation counts of this academic’s YÖKSİS articles matched in OpenAlex (not Google Scholar, WoS or Scopus). Unmatched articles are not included. 1 articles (8 citations) tagged with this academic’s YÖK author id in co-authors’ YÖKSİS records count only towards citations, h-index and i10; article counts, percentiles and rankings use their own YÖKSİS list.

Citing publications Crossref 219 publications citing 54 DOI-bearing articles · 11 Türkiye-affiliated
  • 2005 1
  • 2006 1
  • 2018 3
  • 2019 48
  • 2020 46
  • 2021 69
  • 2022 25
  • 2025 21
  • 2026 5
  1. DOI 10.1016/j.chemphys.2025.113027 2026
  2. DOI 10.1016/j.jorganchem.2025.123952 2026
  3. DOI 10.1016/b978-0-443-36318-4.00023-6 2026
  4. DOI 10.1016/j.psj.2025.106247 2026
  5. DOI 10.1016/j.apgeochem.2025.106609 2026
  6. Exploring the bifunctionality of aminotransferases in the arogenate route of l -tyrosine synthesis TR Eldin Kurpejović et al. · Journal of Biomolecular Structure and Dynamics · 2025
  7. Characterization of polyextremotolerant bacterial strains (Kocuria, Virgibacillus, and Halomonas) with industrial potential isolated from the İzmir Çamaltı Saltern TR Ebru Tekin et al. · Ege Journal of Fisheries and Aquatic Sciences · 2025 · cites 2 articles of this academic
  8. Production of the terpenoid-based biofuel α-bisabolene by metabolically engineered Corynebacterium glutamicum TR Basak Atas Erden et al. · World Journal of Microbiology and Biotechnology · 2025 · cites 2 articles of this academic
  9. DOI 10.1101/2025.11.12.687962 2025
  10. DOI 10.1101/2025.11.17.688048 2025
  11. DOI 10.1039/9781837678198-00186 2025
  12. DOI 10.1134/s1068162025150208 2025 · cites 2 articles of this academic
  13. DOI 10.1186/s12903-025-07433-w 2025
  14. DOI 10.70322/sbe.2025.10016 2025 · cites 2 articles of this academic
  15. DOI 10.1021/acs.analchem.5c02340 2025
  16. DOI 10.1002/anie.202517709 2025
  17. DOI 10.1007/s10787-025-02089-y 2025
  18. DOI 10.1016/j.copbio.2025.103372 2025 · cites 2 articles of this academic
  19. DOI 10.1002/ange.202517709 2025
  20. DOI 10.1002/ps.70339 2025
  21. DOI 10.1016/j.egg.2025.100431 2025
  22. DOI 10.1080/17425247.2025.2587940 2025
  23. DOI 10.1101/2025.10.27.684880 2025
  24. DOI 10.1101/2025.11.05.686735 2025
  25. DOI 10.1128/aac.01099-25 2025
  26. DOI 10.3389/fmars.2025.1698327 2025
  27. Carvacrol Enhances the Antimicrobial Potency of Berberine in Bacillus subtilis TR Basak Atas et al. · Current Microbiology · 2022
  28. Curvularia lunata: A fungus for possible berberine transformation TR Deniz YILMAZ et al. · International Journal of Secondary Metabolite · 2022
  29. DOI 10.3389/fchem.2021.795433 2022
  30. DOI 10.3390/molecules27030653 2022

Showing the 30 most recent.

Where does this list come from?

Extracted from the reference lists in Crossref’s public March 2026 data file; 20.3% of the file has been processed, so the list may be incomplete. Crossref citations are never added to or compared with the OpenAlex citation counts; the two sources have different coverage.

Field ranking

Position in the main-field, side-field and keyword cohorts by YÖKSİS article score; each card opens that ranking.

YÖKSİS ?
Keyword rankings 3

Works 57

YÖKSİS and OpenAlex records: index distribution, journals published in, a filterable article list and the other output types.

Indexes and citation percentiles

?
TR Index 3 articles
OpenAlex citation percentile
Top 1%1
Top 10%4
Avg · n 55 %63.3
Other counts

Scopus (SJR)

  • YÖKSİS rows 54

WoS (JCR)

  • YÖKSİS rows 52

Articles

Articles with YÖKSİS and OpenAlex source split; narrow by quartile or TR Index.

57articles

Journals with publications

41 journals

Narrow down

Scopus (SJR)
Q121 Q226 Q35 Q41
WoS (JCR)
Q116 Q213 Q318 Q44
TR Index
3articles

Article list

  1. 2025 Exploring the bifunctionality of aminotransferases in the arogenate route of l-tyrosine synthesis Journal of Biomolecular Structure and Dynamics DOI 10.1080/07391102.2025.2600483 YÖKSİS SJR Q2 JCR Q3 OpenAlex 18.2%
  2. 2025 Exploring the coupling of dynamic residues in TEM-1 β-lactamase and their role in activity Journal of Biomolecular Structure and Dynamics DOI 10.1080/07391102.2025.2516144 YÖKSİS SJR Q2 JCR Q3 OpenAlex 9.5%
  3. 2025 De novo production of eumelanin in a fermentative process with Corynebacterium glutamicum Biocatalysis and Biotransformation DOI 10.1080/10242422.2025.2485090 YÖKSİS SJR Q3 JCR Q4 OpenAlex 5.3%
  4. 2025 Model-based engineering of Bacillus methanolicus towards de novo polyamine bioproduction from methanol New Biotechnology DOI 10.1016/j.nbt.2025.07.001 YÖKSİS SJR Q1 JCR Q1 OpenAlex 79.2%
  5. 2025 Tailoring Corynebacterium glutamicum for Sustainable Biomanufacturing: From Traditional to Cutting-Edge Technologies Molecular Biotechnology DOI 10.1007/s12033-025-01447-z YÖKSİS SJR Q2 JCR Q3 OpenAlex 7.5%
  6. 2025 Production of the terpenoid-based biofuel α-bisabolene by metabolically engineered Corynebacterium glutamicum World Journal of Microbiology and Biotechnology DOI 10.1007/s11274-025-04588-0 YÖKSİS SJR Q1 JCR Q2 OpenAlex 81.0%
  7. 2024 Development of a novel process towards an l-malate biorefinery using methanol as feedstock Chemical Engineering Research and Design DOI 10.1016/j.cherd.2024.10.027 YÖKSİS SJR Q2 JCR Q2 OpenAlex 35.1%
  8. 2024 Utilization of orange peel waste for sustainable amino acid production by Corynebacterium glutamicum Frontiers in Bioengineering and Biotechnology DOI 10.3389/fbioe.2024.1419444 YÖKSİS SJR Q1 JCR Q1 OpenAlex top 10% OpenAlex 93.3%
  9. 2024 Antivirulence therapy: type IV pilus as a druggable target for bacterial infections Medicinal Chemistry Research DOI 10.1007/s00044-024-03338-5 YÖKSİS SJR Q2 JCR Q3 OpenAlex 73.5%
  10. 2024 Attenuation of Type IV pili activity by natural products Journal of Biomolecular Structure and Dynamics DOI 10.1080/07391102.2024.2310781 YÖKSİS SJR Q2 JCR Q3 OpenAlex 56.5%
  11. 2023 A two-step purification platform for efficient removal of Fab-related impurities: A case study for Ranibizumab Heliyon DOI 10.1016/j.heliyon.2023.e21001 YÖKSİS SJR Q1 JCR Q1 OpenAlex 73.2%
  12. 2023 Valorization of hazelnut husk as a carbon source for l-DOPA production with Corynebacterium glutamicum Biochemical Engineering Journal DOI 10.1016/j.bej.2022.108768 YÖKSİS SJR Q2 JCR Q2 OpenAlex 60.8%
  13. 2023 Metabolic engineering of Corynebacterium glutamicum for l-tyrosine production from glucose and xylose Journal of Biotechnology DOI 10.1016/j.jbiotec.2022.12.005 YÖKSİS SJR Q2 JCR Q2 OpenAlex 89.5%
  14. 2023 Piperidine-based natural products targeting Type IV pili antivirulence: A computational approach Journal of Molecular Graphics and Modelling DOI 10.1016/j.jmgm.2022.108382 YÖKSİS SJR Q2 JCR Q1 OpenAlex 59.7%
  15. 2023 Can Genome Sequencing Coupled to Flux Balance Analyses Offer Precision Guidance for Industrial Strain Development? The Lessons from Carbon Trafficking in Corynebacterium glutamicum ATCC 21573 OMICS A Journal of Integrative Biology DOI 10.1089/omi.2023.0098 YÖKSİS SJR Q2 JCR Q3 OpenAlex 39.8%
  16. 2022 Curcumin Displays Enhanced Solubility and Antibacterial Activities When Complexed with the Cell Penetrating Peptide pVEC International Journal of Peptide Research and Therapeutics DOI 10.1007/s10989-022-10415-z YÖKSİS SJR Q3 JCR Q4 OpenAlex 36.3%
  17. 2022 Carvacrol Enhances the Antimicrobial Potency of Berberine in Bacillus subtilis Current Microbiology DOI 10.1007/s00284-022-02823-7 YÖKSİS SJR Q2 JCR Q3 OpenAlex 69.1%
  18. 2022 A review on the mechanistic details of OXA enzymes of ESKAPE pathogens Informa UK Limited DOI 10.1080/20477724.2022.2088496 YÖKSİS SJR Q2 JCR Q1 OpenAlex 64.0%
  19. 2022 Curvularia lunata: A fungus for possible berberine transformation International Journal of Secondary Metabolite DOI 10.21448/ijsm.996589 YÖKSİS TR Index SJR Q4 OpenAlex 39.7%
  20. 2021 Tyrosinase-based production of l-DOPA by Corynebacterium glutamicum Applied Microbiology and Biotechnology DOI 10.1007/s00253-021-11681-5 YÖKSİS SJR Q1 JCR Q1 OpenAlex 81.6%

Projects 16 See all (16) →

  1. 2020 Tip 4 Pili Protein Kompleksinin Inhibisyonu Ve Inhibisyon Dinamiğinin Karakterizasyonu -Tübitak 1001 · Tamamlandı 2020-08-01 – 2024-02-01
  2. 2021 Rasyonel Tasarım ile Corynebacterium glutamicum'un L-Dopa Üretimi Için Bir Mikrobiyal Hücre Fabrikasına Dönüştürülmesi ve L-Dopa Üretim Prosesinin Geliştirilmesi Uluslararası İkili İşbirliği Programları · Tamamlandı 2021-04-01 – 2024-10-01
  3. 2021 Sürdürülebilir Biyoekonomi Için Gıda Ile Yarışan Sübstratların Metanol, CO2 ve Metilamin Ile Değiştirilmesi Avrupa Birliği · Tamamlandı 2021-04-01 – 2024-04-01
  4. 2020 Peptidlerle ilişkili bağışıklık sistemi proteinlerinin çalışma mekanizmalarının aydınlatılması TÜSEB · Tamamlandı 2020-04-27 – 2022-07-27
  5. 2017 Metabolik Mühendisliği Yöntemlerini Kullanarak Corynebacterium Glutamicum Microorganizmasında L-Dopa Üretiminin Geliştirilmesi -Tübitak 1002 · Tamamlandı 2017-12-01 – 2018-12-01

Books 4

  1. 2025 Production of Organic Acids and Alcohols from Agricultural Residues and Food Wastes Springer Nature Singapore ISBN 9819612217 Kitap Bölümü · Bilimsel Kitap
  2. 2021 Studies in Natural Products Chemistry Elsevier ISBN 978-0-12-819489-8 Kitap Bölümü · Bilimsel Kitap
  3. 2020 Fermente Ürünler Teknolojisi ve Mikrobiyolojisi Nobel Akademik Yayıncılık ISBN 978-625-406-665-8 Kitap Bölümü · Bilimsel Kitap
  4. 2012 Binding Protein INTECH Kitap Bölümü · Bilimsel Kitap

Proceedings 28 See all (28) →

  1. 2017 Adaptation of B. Marmarensis Sp Nov To Extreme Alkaline Conditions 7th Congress of European Microbiologists (FEMS),
  2. 2017 Optimisation of extracellular lipase production by Cryptococcus diffluens D44. 7th Congress of European Microbiologists (FEMS 2017)
  3. 2017 Roemerine: A New Multidrug Resistance Pump Inhibitor? FEMS Kongresi
  4. 2017 Roemerine: A new multidrug resistance pump inhibitor? 7th Congress of European Microbiologists
  5. 2017 Optimisation of Extracellular Lipase Production by Cryptococcus diffluens D44 FEMS Kongresi

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Collaboration network

From the author lists of YÖKSİS publication records. Duplicate records of a work count once; institutions are co-authors’ current YÖKSİS affiliations.

Co-authors
143
With an akaturk profile
40
Turkish institutions
24
Co-authored works
%96

Academic co-authors 40

  1. FATMA GİZEM AVCI Doçent · Üsküdar Üniversitesi 20
  2. NİHAT ALPAGU SAYAR Profesör · Marmara Üniversitesi same university 14
  3. FATMA ECE ALTINIŞIK KAYA Doktor Öğretim Üyesi · Marmara Üniversitesi same university 8
  4. PEMRA ÖZBEK SARICA Profesör · Marmara Üniversitesi same university 6
  5. GİZEM GÜLSOY TOPLAN Doçent · Sağlık Bilimleri Üniversitesi 3
  6. SELİM CEYLAN Profesör · Ondokuz Mayıs Üniversitesi 3
  7. ZEHRA ÖZLEM KESKİN ÖZKAYA Profesör · Koç Üniversitesi 3
  8. BÜLENT MERTOĞLU Profesör · Marmara Üniversitesi same university 2
  9. CEYDA KULA Doktor Öğretim Üyesi · Marmara Üniversitesi same university 2
  10. KAZIM YALÇIN ARGA Profesör · Marmara Üniversitesi same university 2
Show all (40)
  1. ŞEFİKA KUTLU ÜLGEN Profesör · Boğaziçi Üniversitesi 2
  2. ŞÜKRÜ UĞUR AKMAN Profesör · Boğaziçi Üniversitesi 2
  3. ABDULLAH BOZKURT Doçent · Atatürk Üniversitesi 1
  4. ABDULLAH İNCE Profesör · Sakarya Üniversitesi 1
  5. ALPER GÖKADA Öğretim Görevlisi (uygulamalı Birim) · Kırklareli Üniversitesi 1
  6. AYSEL TÜRKVATAN CANSEVER Profesör · Sağlık Bilimleri Üniversitesi 1
  7. DENİZ TUĞCU Profesör · İstanbul Üniversitesi 1
  8. EDA TAHİR TURANLI Profesör · Acıbadem Mehmet Ali Aydınlar Üniversitesi 1
  9. ENİS FUAT TÜFEKCİ Doktor Öğretim Üyesi · Kastamonu Üniversitesi 1
  10. ERCAN AKSOY Profesör · Fırat Üniversitesi 1
  11. FATMA COŞTU Doçent · Yıldız Teknik Üniversitesi 1
  12. GİZEM DİNLER DOĞANAY Profesör · İstanbul Teknik Üniversitesi 1
  13. HASAN ÖZGÜR KAPICI Doçent · Boğaziçi Üniversitesi 1
  14. HATİCE ÇÖLGEÇEN Profesör · Zonguldak Bülent Ecevit Üniversitesi 1
  15. ILGAZ TAŞTEKİL ŞEN Araştırma Görevlisi · Sağlık Bilimleri Üniversitesi 1
  16. KÜBRA KARAOĞLU UZUN Doktor Öğretim Üyesi · Karadeniz Teknik Üniversitesi 1
  17. KÜBRA UZUN Araştırma Görevlisi · Erciyes Üniversitesi 1
  18. MURAT DEMİR Profesör · Harran Üniversitesi 1
  19. MUSTAFA GÜNERİGÖK Profesör · Sakarya Üniversitesi 1
  20. ONUR SERÇİNOĞLU Doktor Öğretim Üyesi · Gebze Teknik Üniversitesi 1
  21. OSMAN MUTLUHAN UĞUREL Doktor Öğretim Üyesi · İstanbul Üniversitesi-Cerrahpaşa 1
  22. SAVAŞ AKGÜL Doçent · İstanbul Üniversitesi-Cerrahpaşa 1
  23. SAVAŞ TOPAL Profesör · Pamukkale Üniversitesi 1
  24. SELEN EMİRHANOĞLU Araştırma Görevlisi · Marmara Üniversitesi same university 1
  25. SELÇEN DURMAZ ŞAM Araştırma Görevlisi · Marmara Üniversitesi same university 1
  26. SERAP ACAR Profesör · Yıldız Teknik Üniversitesi 1
  27. SERKAN UÇAN Doçent · İstanbul Medeniyet Üniversitesi 1
  28. SERTAN TALAS Doçent · Tokat Gaziosmanpaşa Üniversitesi 1
  29. YAĞMUR ÖZ Araştırma Görevlisi · Akdeniz Üniversitesi 1
  30. ÖZGE TATLI Doktor Öğretim Üyesi · İstanbul Medeniyet Üniversitesi 1

National collaboration 24 institutions

Within own university24 joint works · Marmara Üniversitesi

  1. Üsküdar Üniversitesi 20 works · 1 academics
  2. Boğaziçi Üniversitesi 5 works · 3 academics
  3. Sağlık Bilimleri Üniversitesi 5 works · 3 academics
  4. Koç Üniversitesi 3 works · 1 academics
  5. Ondokuz Mayıs Üniversitesi 3 works · 1 academics
  6. Yıldız Teknik Üniversitesi 2 works · 2 academics
  7. İstanbul Medeniyet Üniversitesi 2 works · 2 academics
  8. İstanbul Üniversitesi-Cerrahpaşa 2 works · 2 academics
  9. Acıbadem Mehmet Ali Aydınlar Üniversitesi 1 works · 1 academics
  10. Akdeniz Üniversitesi 1 works · 1 academics
Show all (24)
  1. Atatürk Üniversitesi 1 works · 1 academics
  2. Erciyes Üniversitesi 1 works · 1 academics
  3. Fırat Üniversitesi 1 works · 1 academics
  4. Gebze Teknik Üniversitesi 1 works · 1 academics
  5. Harran Üniversitesi 1 works · 1 academics
  6. Karadeniz Teknik Üniversitesi 1 works · 1 academics
  7. Kastamonu Üniversitesi 1 works · 1 academics
  8. Kırklareli Üniversitesi 1 works · 1 academics
  9. Pamukkale Üniversitesi 1 works · 1 academics
  10. Sakarya Üniversitesi 1 works · 2 academics
  11. Tokat Gaziosmanpaşa Üniversitesi 1 works · 1 academics
  12. Zonguldak Bülent Ecevit Üniversitesi 1 works · 1 academics
  13. İstanbul Teknik Üniversitesi 1 works · 1 academics
  14. İstanbul Üniversitesi 1 works · 1 academics

Other co-authors (incl. international) 103

DİLEK KAZAN 14ELİF ÖZKIRIMLI ÖLMEZ 12Volker Wendisch 8Eldin Kurpejović 7BEGÜM ALAYBEYOĞLU 6Amable Hortacsu 5BAŞAK ATAŞ 5Aziz Akın Denizci 4BÜDEYRİ GÖKGÖZ NİLAY 4Gülsüm Merve Bastem 4AHMET ALP SAYAR 3ASLİHAN ÖZCAN 3BRITTA BRÜGGER 3Didem Vardar Ulu 3KATHARINA WOZNY 3KÜBRA KARAOSMANOĞLU YÖNETEN 3ORKUN PİNAR 3ÇAĞLAYAN GURER 3ANNARITA POLI 2Arthur Burgardt 2DİLARA AYYILDIZ 2ESRA BAŞARAN 2Emre Abdullahoglu 2FATMA ECE ALTINIŞIK 2JeanMichel Jault 2Luciana Fernandes Brito 2Nora Junker 2Perk Sinem 2Pınar Özkan 2SELİN AKSOY 2Trygve Brautaset 2Utkur Ozde 2cedric orelle 2duygu şentürk karagöz 2Adshaha ArampuAksan Kurnaz IşılAmit JaisiAndreas DraegerAyşe ErenBARBARA NICOLAUS

Show all (103)

BURAK AYANBaran DingilogluBennett George NBeril PakalınBerkin HarmandaBerrosRivera Susana JBetül KırdarBilge Gedik UluocakBlackwood KimathiBuse AkgunCagakan OzbalciCansın KırmacogluCağlayan ÜnsalCemile Selin AksoyCeren KarciogluDamla SerperDaniel WibbergDavid VirantDeniz YılmazDerya HatipogluDuygu YalçınkayaEbru KoleogluEdanur ÖZDEMİREldin KurpejovicEmily HortonEzgi BastürkFernando Perez-GarciaGÜLDEM UTGANGÜLŞAH YILANGİZEM BULDUMIpek KaracanJan SeegerKamil Serkan UzyolKerem YalkutKubra TurkKÜBRA AYIKLatif AkbulutMERVE YÜCEManfred WoznyMaxime GuillerminetMelis KorkmazNAZE GÜL AVCIOZTURK UMİTPetra Peters WendischRudolph Fred BSERHAT ERŞAHİNSalmanDilgimen AydanSefika Banu OzkanSoumaya Ben Ali HassineSoumaya Ben Ali HassineaSİMAY YALAZTAYFUN ACARTobias BuscheVadali Ravi VWolf D LehmannYang YeaTyngYiu San KaYusuf DemirZEYNEP KARAKAŞZeynep Atabayrok frlantihomir tomasicÖZLEM MELİS KORKMAZ ÖZGÜNGÖR

Authors without an akaturk profile (international researchers, retired or former academics, students, clinicians) are grouped by name spelling; short forms such as “Gulluce M.” join the single full name they match.