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Academician

AHMET YILDIRIM

Profesör

Siirt Üniversitesi Fen-Edebiyat Fakültesi Biyoloji Bölümü

Research topics OpenAlex
  1. Ana Dal Fen Bilimleri ve Matematik Temel Alanı
  2. Yan Dal Biyoloji
Keywords YÖKSİS
Articles 19 YÖKSİS 19 · OpenAlex 0 Total citations 641 h-index 11 · OpenAlex Q1 articles 10 Scopus · WoS Q1 8 Best field rank #387 / 1,161 Keyword · top 33.3% Co-authors 26 4 Turkish institutions

Citation impact

OpenAlex YÖKSİS articles matched in OpenAlex: 18 + YÖKSİS · co-author record: 10
h-index 11 Percentile in Türkiye: 84 #35 of 543 at their university by h-index
i10-index
13
Total citations
641
Top 11% in Türkiye
Per article
22.9
FWCI
1.45
1.00 = world average
World top 1%
0
World top 10%
5

Most cited articles

  1. Properties of Organic Liquids when Simulated with Long Range Lennard Jones Interactions 2015 world top 10% 149 citations
  2. Accurate absolute free energies for ligand-protein binding based on non-equilibrium approaches 2021 world top 10% 137 citations
  3. First principles study of the structural elastic electronic optical and vibrational properties of intermetallic Pd2Ga 2012 95 citations
How is this computed?

h-index and citations are computed from the citation counts of this academic’s YÖKSİS articles matched in OpenAlex (not Google Scholar, WoS or Scopus). Unmatched articles are not included. 10 articles (116 citations) tagged with this academic’s YÖK author id in co-authors’ YÖKSİS records count only towards citations, h-index and i10; article counts, percentiles and rankings use their own YÖKSİS list. h-index on the OpenAlex author profile: 11.

Field ranking

YÖKSİS ?
Keyword rankings 1

Collaboration network

From the author lists of YÖKSİS publication records. Duplicate records of a work count once; institutions are co-authors’ current YÖKSİS affiliations.

Co-authors
26
With an akaturk profile
6
Turkish institutions
4
Co-authored works
%100

Academic co-authors 6

  1. MUSTAFA TEKPINAR Doçent · Van Yüzüncü Yıl Üniversitesi 7
  2. SÜLEYMAN YILMAZ Profesör · Aksaray Üniversitesi 4
  3. ENGİN DELİGÖZ Profesör · Aksaray Üniversitesi 3
  4. HÜSNÜ KOÇ Profesör · Siirt Üniversitesi same university 3
  5. MEHRİBAN EMEK Doktor Öğretim Üyesi · Adana Alparslan Türkeş Bilim Ve Teknoloji Üniversitesi 2
  6. MURAT VURAL Doktor Öğretim Üyesi · Ondokuz Mayıs Üniversitesi 1

National collaboration 4 institutions

Within own university3 joint works · Siirt Üniversitesi

  1. Aksaray Üniversitesi 7 works · 2 academics
  2. Van Yüzüncü Yıl Üniversitesi 7 works · 1 academics
  3. Adana Alparslan Türkeş Bilim Ve Teknoloji Üniversitesi 2 works · 1 academics
  4. Ondokuz Mayıs Üniversitesi 1 works · 1 academics

Other co-authors (incl. international) 20

David van der Spoel 4Tsjerk A Wassenaar 3Bert L. de GrootBesli NurettinEroglu ErolFırat AnğayHülya UnanJin ZhangJonas C DitzMatteo AldeghiMelik HalideMohammad Mehdi GhahremanpourNina M FischerPaul J van MaarenSergio ManzettiTA WASSENAARTetik E.Vytautas GapsysYuriy Khalakder Spoel van

Authors without an akaturk profile (international researchers, retired or former academics, students, clinicians) are grouped by name spelling; short forms such as “Gulluce M.” join the single full name they match.

Indexes and citation percentiles

?
TR Index 0 articles
OpenAlex citation percentile
Top 1%0
Top 10%2
Avg · n 18 %54.9
Other counts

Scopus (SJR)

  • YÖKSİS rows 18

WoS (JCR)

  • YÖKSİS rows 18

Articles

Articles with YÖKSİS and OpenAlex source split; narrow by quartile or TR Index.

19articles

Journals with publications

17 journals

Narrow down

Scopus (SJR)
Q110 Q25 Q33 Q40
WoS (JCR)
Q18 Q23 Q36 Q41
TR Index
0articles

Article list

  1. 2023 Building Quantitative Bridges between Dynamics and Sequences of SARS-CoV-2 Main Protease and a Diverse Set of Thirty-Two Proteins American Chemical Society (ACS) DOI 10.1021/acs.jcim.2c01206 YÖKSİS SJR Q1 JCR Q1 OpenAlex 9.5%
  2. 2022 Impact of dimerization and N3 binding on molecular dynamics of SARS-CoV and SARS-CoV-2 main proteases Journal of Biomolecular Structure and Dynamics DOI 10.1080/07391102.2021.1880481 YÖKSİS SJR Q2 JCR Q1 OpenAlex 81.4%
  3. 2021 Accurate absolute free energies for ligand-protein binding based on non-equilibrium approaches Communications Chemistry DOI 10.1038/s42004-021-00498-y YÖKSİS SJR Q1 JCR Q1 OpenAlex top 10% OpenAlex 98.5%
  4. 2021 Competing Roles of Ca2+ and Nonmuscle Myosin IIA on the Dynamics of the Metastasis-Associated Protein S100A4 The Journal of Physical Chemistry B DOI 10.1021/acs.jpcb.1c02096 YÖKSİS SJR Q1 JCR Q3 OpenAlex 45.5%
  5. 2020 Propagation of uncertainty in physicochemical data to force field predictions Physical Review Research DOI https://journals.aps.org/prresearch/pdf/10.1103/PhysRevResearch.2.033277 YÖKSİS SJR Q1 JCR Q1
  6. 2018 Statistical efficiency of methods for computing free energy of hydration The Journal of Chemical Physics DOI 10.1063/1.5041835 YÖKSİS SJR Q1 JCR Q2 OpenAlex 88.8%
  7. 2018 Only a Subset of Normal Modes is Sufficient to Identify Linear Correlations in Proteins Journal of Chemical Information and Modeling DOI 10.1021/acs.jcim.8b00486 YÖKSİS SJR Q1 JCR Q1 OpenAlex 64.8%
  8. 2016 Binding of Pollutants to Biomolecules A Simulation Study Chemical Research in Toxicology DOI 10.1021/acs.chemrestox.6b00189 YÖKSİS SJR Q1 JCR Q1 OpenAlex 61.6%
  9. 2015 Molecular dynamics study of the effect of active site protonation on Helicobacter pylori 5 methylthioadenosine S adenosylhomocysteine nucleosidase European Biophysics Journal DOI 10.1007/s00249-015-1067-0 YÖKSİS SJR Q2 JCR Q4 OpenAlex 57.5%
  10. 2015 Properties of Organic Liquids when Simulated with Long Range Lennard Jones Interactions Journal of Chemical Theory and Computation DOI 10.1021/acs.jctc.5b00190 YÖKSİS SJR Q1 JCR Q1 OpenAlex top 10% OpenAlex 97.7%
  11. 2015 Opening mechanism of adenylate kinase can vary according to selected molecular dynamics force field Journal of Computer-Aided Molecular Design DOI 10.1007/s10822-015-9849-0 YÖKSİS SJR Q1 JCR Q1 OpenAlex 68.0%
  12. 2014 Molecular dynamics investigation of Helicobacter pylori chemotactic protein CheY1 and two mutants Journal of Molecular Modeling DOI 10.1007/s00894-014-2212-x YÖKSİS SJR Q2 JCR Q2 OpenAlex 68.7%
  13. 2012 Ab initio calculation of the structural elastic electronic and linear optical properties of ZrPtSi and TiPtSi ternary compounds Computational Materials Science DOI 10.1016/j.commatsci.2012.05.052 YÖKSİS SJR Q1 JCR Q2 OpenAlex 9.5%
  14. 2012 First principles study of the structural elastic electronic optical and vibrational properties of intermetallic Pd2Ga Chinese Physics B DOI 10.1088/1674-1056/21/3/037101 YÖKSİS SJR Q3 JCR Q3 OpenAlex 72.3%
  15. 2012 Ab initio calculations of the elastic electronic optical and vibrational properties of PdGa compound under pressure Chinese Physics B DOI 10.1088/1674-1056/21/9/097102 YÖKSİS SJR Q3 JCR Q3 OpenAlex 60.3%
  16. 2011 Investigation of anisotropic thermal conductivity of uniaxial and biaxial Gay Berne particles with molecular dynamics simulation Molecular Simulation DOI 10.1080/08927022.2011.589051 YÖKSİS SJR Q2 JCR Q3 OpenAlex 11.0%
  17. 2011 Optical Properties of Aligned Nematic Liquid Crystals in Electric Field Scientific Research Publishing, Inc. DOI 10.4236/jmp.2011.24034 YÖKSİS OpenAlex 38.4%
  18. 2009 Numerical Determination of Thermal Diffusivity Coefficients of Some Nematic Liquid Crystals in Situ International Journal of Thermophysics DOI 10.1007/s10765-009-0670-7 YÖKSİS SJR Q3 JCR Q3 OpenAlex 10.4%
  19. 2009 Optical Properties of Nematic LiquidCrystal C21H27NO2S Under AC DC Electric Fields Canadian Journal of Physics DOI 10.1139/P09-030 YÖKSİS SJR Q2 JCR Q3 OpenAlex 45.0%

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