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Academician

ARZUCAN ÖZGÜR TÜRKMEN

Profesör

Boğaziçi Üniversitesi Mühendislik Fakültesi Bilgisayar Mühendisliği Bölümü

Research topics OpenAlex
  1. Ana Dal Mühendislik Temel Alanı
  2. Yan Dal Bilgisayar Bilimleri ve Mühendisliği
Keywords YÖKSİS
Articles 51 YÖKSİS 51 · OpenAlex 0 Total citations 4,049 h-index 22 · OpenAlex Q1 articles 41 Scopus · WoS Q1 35 Best field rank #63 / 3,782 Side field · top 1.7% Co-authors 193 8 Turkish institutions

Citation impact

OpenAlex YÖKSİS articles matched in OpenAlex: 51 + YÖKSİS · co-author record: 3
h-index 22 Percentile in Türkiye: 98 #28 of 576 at their university by h-index
i10-index
36
Total citations
4,049
Top 0.5% in Türkiye
Per article
75.0
FWCI
3.36
1.00 = world average
World top 1%
1
World top 10%
16

Most cited articles

  1. DeepDTA: deep drug-target binding affinity prediction 2018 world top 1% 1,758 citations
  2. Identifying gene disease associations using centrality on a literature mined gene interaction network 2008 world top 10% 393 citations
  3. PHISTO pathogen host interaction search tool 2013 world top 10% 184 citations
How is this computed?

h-index and citations are computed from the citation counts of this academic’s YÖKSİS articles matched in OpenAlex (not Google Scholar, WoS or Scopus). Unmatched articles are not included. 3 articles (18 citations) tagged with this academic’s YÖK author id in co-authors’ YÖKSİS records count only towards citations, h-index and i10; article counts, percentiles and rankings use their own YÖKSİS list. h-index on the OpenAlex author profile: 29.

Field ranking

YÖKSİS ?
Keyword rankings 2

Collaboration network

From the author lists of YÖKSİS publication records. Duplicate records of a work count once; institutions are co-authors’ current YÖKSİS affiliations.

Co-authors
193
With an akaturk profile
16
Turkish institutions
8
Co-authored works
%100

Academic co-authors 16

  1. ŞEFİKA KUTLU ÜLGEN Profesör · Boğaziçi Üniversitesi same university 4
  2. NURİYE ÖZLEM ÖZCAN ŞİMŞEK Doktor Öğretim Üyesi · Hacettepe Üniversitesi 3
  3. SADIK FİKRET GÜRGEN Profesör · Boğaziçi Üniversitesi same university 3
  4. TUNGA GÜNGÖR Profesör · Boğaziçi Üniversitesi same university 3
  5. BALKIZ BAŞARAN Profesör · Boğaziçi Üniversitesi same university 2
  6. GÖKÇE ULUDOĞAN Araştırma Görevlisi · Boğaziçi Üniversitesi same university 2
  7. NİLGÜN LÜTFİYE KARALI Profesör · İstanbul Üniversitesi 2
  8. TUNAHAN ÇAKIR Profesör · Gebze Teknik Üniversitesi 2
  9. ŞAZİYE BETÜL ÖZATEŞ Doktor Öğretim Üyesi · Boğaziçi Üniversitesi same university 2
  10. ASU BÜŞRA TEMİZER KESER Araştırma Görevlisi · İstanbul Üniversitesi-Cerrahpaşa 1
Show all (16)
  1. AYŞE BERNA ALTINEL GİRGİN Doçent · Marmara Üniversitesi 1
  2. ERDEM YÖRÜK Profesör · Koç Üniversitesi 1
  3. FATİH ERDOĞAN SEVİLGEN Profesör · Fatih Sultan Mehmet Vakıf Üniversitesi 1
  4. GÜNİZİ KARTAL Doçent · Boğaziçi Üniversitesi same university 1
  5. OSMAN HALUK BİNGÖL Profesör · Yeditepe Üniversitesi 1
  6. TUNCA DOĞAN Profesör · Hacettepe Üniversitesi 1

National collaboration 8 institutions

Within own university10 joint works · Boğaziçi Üniversitesi

  1. Hacettepe Üniversitesi 4 works · 2 academics
  2. Gebze Teknik Üniversitesi 2 works · 1 academics
  3. İstanbul Üniversitesi 2 works · 1 academics
  4. Fatih Sultan Mehmet Vakıf Üniversitesi 1 works · 1 academics
  5. Koç Üniversitesi 1 works · 1 academics
  6. Marmara Üniversitesi 1 works · 1 academics
  7. Yeditepe Üniversitesi 1 works · 1 academics
  8. İstanbul Üniversitesi-Cerrahpaşa 1 works · 1 academics

Other co-authors (incl. international) 177

ELİF ÖZKIRIMLI ÖLMEZ 11Yongqun He 9Junguk Hur 8HAKİME ÖZTÜRK 7Dragomir R Radev 6Zuoshuang Xiang 4İlknur Karadeniz 4RIZA ÖZÇELİK 3Sun Kim 3Zehra Melce Hüsünbeyi 3Alperen Bağ 2Andrew Chatr-aryamontri 2Arda Çelebi 2Berk Atıl 2Donald C Comeau 2Doğan Rezarta Islamaj 2Ferhat Aydın 2GÖNÜL AYCI 2Güneş Erkan 2Hong-Jie Dai 2Karin Verspoor 2Lawrence Hunter 2MELİH BARSBEY 2MURAT ŞENSOY 2PINAR YOLUM BİRBİL 2Rune Sætre 2SALİHA DURMUŞ 2Soo Yong Shin 2Sophia Ananiadou 2ABDULLATİF KÖKSALAaron BookvichAdriane ChapmanAhmet YıldırımAlbert SteppiAlberto Pascual-MontanoAlex AdeAlfonso ValenciaAli Semih SayılırbaşAndre SantosAparna Elangovan

Show all (177)

Aris FergadisArtur YakimovichAtacan Deniz OncuAzat UğurluBarry HaddowBrian AtheyByoung-Tak ZhangCANER DERİCİCETIN BURAKCalvin A JohnsonCarlos Rodriguez-PenagosCathy H WuCecilia ArighiChen-Kai WangCheng-Ju KuoChien Chin ChenChih-Hsuan WeiChris SanderChristie S ChangChristophe RoederChun Han ChuChun-Nan HsuConrad PlakeDavid CamposDavid StatesDongseop KwonESRA ÇINAREkaterina BuykoEmily Chia Yu SuEmre ArdıçErinç GökdenizFURKAN ATMACAFilip GinterFlorian LeitnerFrédéric EhrlerGizem SoğancıoğluGökhan KonukGözde BerkH V JagadishHalil KilicogluHamza KarakurtHasan H OtuHasret SarıyerHong-Woo ChunHongfang LiuHongjiu ZhangHsi-Chuan HungJacob CarterJari BjörneJeffrey R BrenderJennifer RustJianyi YangJignesh PatelJim CavalcoliJin-Dong KimJinchan QuJinfeng ZhangJing GaoJitendra JonnagaddalaJose Luis OliveiraJun'ichi TsujiiJörg HakenbergK Bretonnel CohenK Vijay ShankerKara DolinskiKazuhiro YoshidaKazım Kıvanç ErenLing LuoMERT TİFTİKCİMUSA NURİ İHTİYARMagesh JayapandianMakoto MiwaMariana NevesMartin KrallingerMelike KorucuogluMichael KrauthammerMichael MatthewsMike TyersMirel BarbaraMithat KonukNagesh C PanyamNİHAL YAĞMUR AYDINOnkar SinghPatrick RuchPhilippe SchwallerQingyu ChenRamakanth KavuluruReinhard GuthkeReşit CanbeyliRichard Tzong Han TsaiRiza Batista NavarroRobert HoffmannRose OughtredRui AntunesSabine BerglerSampo PyysaloSebastian RiedelSergio MatosSeyyit Talha BedirSofie Van LandeghemSuzan ÜsküdarlıSérgio MatosTAFLAN İMRE GÜNDEMTaha KoulaniTapio SalakoskiTeodoro LainoTerry WeymouthThaiBinh LuongThomas Van ParysThuy VuTomoko OhtaTung TranUTKU TÜRKUdo HahnV Glenn TarceaVasudeva MahavisnoW John WilburWallace K ChanWen Lian HsuWilliam A BaumgartnerWilliam W LauXinglong WangYan Hua ChenYang ZhangYanshan WangYifan PengYoshinobu KanoYu Chen SuYuanyuan TianYung Chun ChangYves Van de PeerYİĞİT AYDINZach WrightZhiyong LuZhuang LiuÇİĞDEM YENİALACAŞenol İşçi

Authors without an akaturk profile (international researchers, retired or former academics, students, clinicians) are grouped by name spelling; short forms such as “Gulluce M.” join the single full name they match.

Indexes and citation percentiles

?
TR Index 0 articles
OpenAlex citation percentile
Top 1%1
Top 10%16
Avg · n 50 %78.9
Other counts

Scopus (SJR)

  • YÖKSİS rows 49

WoS (JCR)

  • YÖKSİS rows 51

Articles

Articles with YÖKSİS and OpenAlex source split; narrow by quartile or TR Index.

51articles

Journals with publications

26 journals

Narrow down

Scopus (SJR)
Q141 Q27 Q31 Q40
WoS (JCR)
Q135 Q28 Q36 Q42
TR Index
0articles

Article list

  1. 2025 GNNMutation: a heterogeneous graph-based framework for cancer detection BMC BIOINFORMATICS DOI 10.1186/s12859-025-06133-0 YÖKSİS SJR Q1 JCR Q1 OpenAlex 57.6%
  2. 2025 Alterations in Gut Microbiota-Brain Axis in Major Depressive Disorder as Identified by Machine Learning OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY DOI 10.1089/omi.2025.0084 YÖKSİS SJR Q3 JCR Q3 OpenAlex 83.8%
  3. 2024 Generative language models on nucleotide sequences of human genes SCIENTIFIC REPORTS DOI 10.1038/s41598-024-72512-x YÖKSİS SJR Q1 JCR Q1 OpenAlex 70.0%
  4. 2024 Exploring data-driven chemical SMILES tokenization approaches to identify key protein-ligand binding moieties MOLECULAR INFORMATICS DOI 10.1002/minf.202300249 YÖKSİS SJR Q2 JCR Q1 OpenAlex 69.1%
  5. 2023 A Computational Software for Training Robust Drug-Target Affinity Prediction Models: pydebiaseddta Journal of Computational Biology DOI 10.1089/cmb.2023.0194 YÖKSİS SJR Q2 JCR Q2 OpenAlex 16.6%
  6. 2023 A Framework for Improving the Generalizability of Drug-Target Affinity Prediction Models Journal of Computational Biology DOI 10.1089/cmb.2023.0208 YÖKSİS SJR Q2 JCR Q2 OpenAlex 70.2%
  7. 2023 Improving the filtering of false positive single nucleotide variations by combining genomic features with quality metrics BIOINFORMATICS DOI 10.1093/bioinformatics/btad694 YÖKSİS SJR Q1 JCR Q1 OpenAlex 79.7%
  8. 2023 Can We Explain Privacy? IEEE INTERNET COMPUTING DOI 10.1109/MIC.2023.3270768 YÖKSİS SJR Q1 JCR Q1 OpenAlex 7.2%
  9. 2022 Exploiting pretrained biochemical language models for targeted drug design BIOINFORMATICS DOI 10.1093/bioinformatics/btac482 YÖKSİS SJR Q1 JCR Q1 OpenAlex 88.3%
  10. 2022 Uncertainty-aware Personal Assistant for Making Personalized Privacy Decisions ACM Transactions on Internet Technology DOI 10.1145/3561820 YÖKSİS SJR Q1 JCR Q1 OpenAlex 87.8%
  11. 2022 A Hybrid Deep Dependency Parsing Approach Enhanced With Rules and Morphology: A Case Study for Turkish IEEE ACCESS DOI 10.1109/ACCESS.2022.3202947 YÖKSİS SJR Q1 JCR Q2 OpenAlex 71.8%
  12. 2021 Resources for Turkish dependency parsing: introducing the BOUN Treebank and the BoAT annotation tool Language Resources and Evaluation DOI 10.1007/s10579-021-09558-0 YÖKSİS SJR Q1 JCR Q4 OpenAlex 69.0%
  13. 2021 Editorial: Machine Learning Methodologies to Study Molecular Interactions Frontiers in Molecular Biosciences DOI 10.3389/fmolb.2021.806474 YÖKSİS SJR Q1 JCR Q1
  14. 2021 A novel gene selection method for gene expression data for the task of cancer type classification Biology Direct DOI 10.1186/s13062-020-00290-3 YÖKSİS SJR Q1 JCR Q1 OpenAlex 71.4%
  15. 2020 Exploring chemical space using natural language processing methodologies for drug discovery DRUG DISCOVERY TODAY DOI 10.1016/j.drudis.2020.01.020 YÖKSİS SJR Q1 JCR Q1 OpenAlex top 10% OpenAlex 98.8%
  16. 2020 ChemBoost: A Chemical Language Based Approach for Protein - Ligand Binding Affinity Prediction Molecular Informatics DOI 10.1002/minf.202000212 YÖKSİS SJR Q2 JCR Q2 OpenAlex 87.7%
  17. 2020 Cluster-based mention typing for named entity disambiguation Natural Language Engineering DOI 10.1017/S1351324920000443 YÖKSİS SJR Q2 JCR Q3 OpenAlex 60.8%
  18. 2019 Machine learning-based identification and rule-based normalization of adverse drug reactions in drug labels BMC BIOINFORMATICS DOI 10.1186/s12859-019-3195-5 YÖKSİS SJR Q1 JCR Q1 OpenAlex 70.6%
  19. 2019 Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine Database DOI 10.1093/database/bay147 YÖKSİS SJR Q1 JCR Q2 OpenAlex top 10% OpenAlex 95.5%
  20. 2019 Linking entities through an ontology using word embeddings and syntactic re-ranking BMC BIOINFORMATICS DOI 10.1186/s12859-019-2678-8 YÖKSİS SJR Q1 JCR Q1 OpenAlex 88.4%

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