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Makale detayı · 2015 · article

De Novo Transcriptome Assembly andComparative Analysis Elucidate ComplicatedMechanism Regulating Astragaluschrysochlorus Response to Selenium Stimuli

Dergi PLOS ONE
YÖKSİS OpenAlex Açık erişim · gold Üst %10
Yıl2015
Atıf23OpenAlex
Atıf20Semantic Scholar · 1 etkili
Yüzdelik%94,9
FWCI5,371,00 = dünya ortalaması
Scopus (SJR)Q1
WoS (JCR)Q1

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  • YÖKSİSYÖKSİS makale kaydı
  • YÖKSİS dergi adıPLOS ONE
  • OpenAlexOpenAlex zenginleştirmesi (özet, atıf, konular)
  • Semantic Scholaratıf sayısı (OpenAlex ile birleştirilmez)

Özet

OpenAlex İngilizce

Astragalus species are medicinal plants that are used in the world for years. Some Astragalus species are known for selenium accumulation and tolerance and one of them is Astragalus chrysochlorus, a secondary selenium accumulator. In this study, we employed Illumina deep sequencing technology for the first time to de novo assemble A. chrysochlorus transcriptome and identify the differentially expressed genes after selenate treatment. Totally, 59,656 unigenes were annotated with different databases and 53,960 unigenes were detected in NR database. Transcriptome in A. chrysochlorus is closer to Glycine max than other plant species with 43,1 percentage of similarity. Annotated unigenes were also used for gene ontology enrichment and pathway enrichment analysis. The most significant genes and pathways were ABC transporters, plant pathogen interaction, biosynthesis of secondary metabolites and carbohydrate metabolism. Our results will help to enlighten the selenium accumulation and tolerance mechanisms, respectively in plants.

Konular

Atıflar

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23atıfOpenAlex · cited_by_count (önbellek / veritabanı)

Yerel katalogda bu makaleye atıf yapan 1 yayın (OpenAlex referans eşleşmesi; tam dünya listesi değildir).

  1. 2018 Identification and production of phenolic nicotiflorin in Astragalus chrysochlorus callusAtıf 6 · OpenAlex

Yazarlar

4
  1. ÖZGÜR ÇAKIR 1
  2. NESLİHAN TURGUT KARA 2
  3. ŞULE ARI İSTANBUL ÜNİVERSİTESİ 3
  4. Zhang Baohong 4